Members

Mark Chaisson
Principal Investigator
ude.csu@ossiahcm

Soyeon Ahn
Postdoctoral Researcher
ude.csu@hanoeyos

Centromere assembly

Jianzhi Yang
PhD Student
ude.csu@yihznaij

Assembly algorithms
Error detection

Jingwen Ren
PhD Student
ude.csu@rnewgnij

Long-read aligner
Sparse dynamic programming

Robel Dagnew
PhD Student
rdagnew@usc.edu

Segmental duplication detection

Tsung-Yu Lu
PhD Student
tsungyul@usc.edu

Repeat-pan genome graph
VNTR genotyping
eQTL mapping

Virginia Nunez Mir
PhD Student
nunezmir@usc.edu

Bryan Dinh
Rotating Student
bldinh@usc.edu

Yibei Jiang
Rotating Student
ude.csu@aijiebiy